3Q3X Hydrolase date Dec 22, 2010
title Crystal Structure Of The Main Protease (3c) From Human Enter Ev93
authors L.Costenaro, M.Sola, B.Coutard, H.Norder, B.Canard, M.Coll
compound source
Molecule: Hevb Ev93 3c Protease
Chain: A, B
Ec: 3.4.22.28
Engineered: Yes
Mutation: Yes
Organism_scientific: Human Enterovirus B
Organism_taxid: 138949
Gene: 3c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdest14
symmetry Space Group: P 1 21 1
R_factor 0.148 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.072 65.216 66.355 90.00 90.67 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand GOL, MG, OCS enzyme Hydrolase E.C.3.4.22.28 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis for antiviral inhibition of the main protease 3C from human enterovirus 93., Costenaro L, Kaczmarska Z, Arnan C, Janowski R, Coutard B, Sola M, Gorbalenya AE, Norder H, Canard B, Coll M, J Virol. 2011 Aug 10. PMID:21835784
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (3q3x.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (3q3x.pdb2.gz) 35 Kb
  • Biological Unit Coordinates (3q3x.pdb3.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 3Q3X
  • CSU: Contacts of Structural Units for 3Q3X
  • Structure Factors (395 Kb)
  • Retrieve 3Q3X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q3X from S2C, [Save to disk]
  • Re-refined 3q3x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3Q3X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3Q3X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3Q3X, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q3x] [3q3x_B] [3q3x_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3Q3X
  • Community annotation for 3Q3X at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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