3Q6M	Chaperone	date	Jan 03, 2011
title	Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
authors	C.C.Lee, T.W.Lin, T.P.Ko, A.H.J.Wang
compound		source
Molecule: Heat Shock Protein Hsp 90-Alpha Chain: A, B, C Fragment: Middle And C-Terminal Domain, Unp Residues 293-73 Synonym: Hsp90, Heat Shock 86 Kda, Hsp 86, Hsp86, Renal Car Antigen Ny-Ren-38; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hsp90aa1, Hsp90a, Hspc1, Hspca Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p-1
symmetry	Space Group: C 2 2 21	R_factor 0.209 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 162.702 304.553 87.624 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	SO4	enzyme

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (410 Kb) [Save to disk] Biological Unit Coordinates (3q6m.pdb1.gz) 798 Kb LPC: Ligand-Protein Contacts for 3Q6M CSU: Contacts of Structural Units for 3Q6M Structure Factors (653 Kb) Retrieve 3Q6M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3Q6M from S2C, [Save to disk] Re-refined 3q6m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3Q6M in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 3Q6M

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3Q6M, from MSDmotif at EBI Fold representative 3q6m from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3q6m_A] [3q6m_B] [3q6m_C] SWISS-PROT database: Domain organization of by SWISSPFAM Alignments of the sequence of 3Q6M with the sequences similar proteins can be viewed for 3Q6M's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.

Other resources with information on 3Q6M

Community annotation for 3Q6M at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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