3Q6N Chaperone date Jan 03, 2011
title Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
authors C.C.Lee, T.W.Lin, T.P.Ko, A.H.J.Wang
compound source
Molecule: Heat Shock Protein Hsp 90-Alpha
Chain: A, B, C, D, E, F
Fragment: Middle And C-Terminal Domain, Unp Residues 293-73
Synonym: Heat Shock 86 Kda, Hsp 86, Hsp86, Renal Carcinoma Ny-Ren-38;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hsp90aa1, Hsp90a, Hspc1, Hspca
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p-1
symmetry Space Group: P 1 21 1
R_factor 0.204 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
157.897 90.868 167.093 90.00 115.85 90.00
method X-Ray Diffractionresolution 3.05 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (781 Kb) [Save to disk]
  • Biological Unit Coordinates (3q6n.pdb1.gz) 767 Kb
  • LPC: Ligand-Protein Contacts for 3Q6N
  • CSU: Contacts of Structural Units for 3Q6N
  • Structure Factors (1129 Kb)
  • Retrieve 3Q6N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q6N from S2C, [Save to disk]
  • Re-refined 3q6n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3Q6N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3Q6N
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3Q6N, from MSDmotif at EBI
  • Fold representative 3q6n from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q6n_A] [3q6n_D] [3q6n] [3q6n_C] [3q6n_E] [3q6n_B] [3q6n_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Alignments of the sequence of 3Q6N with the sequences similar proteins can be viewed for 3Q6N's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 3Q6N
  • Community annotation for 3Q6N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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