3QAK Signaling Protein, Hydrolase date Jan 11, 2011
title Agonist Bound Structure Of The Human Adenosine A2a Receptor
authors F.Xu, H.Wu, V.Katritch, G.W.Han, V.Cherezov, R.Stevens, Gpcr Netwo
compound source
Molecule: Adenosine Receptor A2a,Lysozyme Chimera
Chain: A
Synonym: Endolysin, Lysis Protein, Muramidase
Ec: 3.2.1.17
Engineered: Yes
Organism_scientific: Homo Sapien, Enterobacteria Phage T4
Organism_taxid: 9606, 10665
Gene: Adora2, Adora2a, E
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_vector_type: Plasmid
Expression_system_vector: Pbac5b-830400
symmetry Space Group: P 1 21 1
R_factor 0.217 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.836 78.944 86.579 90.00 100.54 90.00
method X-Ray Diffractionresolution 2.71 Å
ligand OLC, UKA BindingDB enzyme Hydrolase E.C.3.2.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of an agonist-bound human A2A adenosine receptor., Xu F, Wu H, Katritch V, Han GW, Jacobson KA, Gao ZG, Cherezov V, Stevens RC, Science. 2011 Apr 15;332(6027):322-7. Epub 2011 Mar 10. PMID:21393508
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (3qak.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 3QAK
  • CSU: Contacts of Structural Units for 3QAK
  • Structure Factors (254 Kb)
  • Retrieve 3QAK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3QAK from S2C, [Save to disk]
  • Re-refined 3qak structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3QAK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3QAK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3QAK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3qak_A] [3qak]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3QAK
  • Community annotation for 3QAK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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