3QWW	Transferase Transferase Inhibitor	date	Feb 28, 2011
title	Crystal Structure Of Histone Lysine Methyltransferase Smyd2 With The Methyltransferase Inhibitor Sinefungin
authors	Y.Jiang, N.Sirinupong, J.Brunzelle, Z.Yang
compound		source
Molecule: Set And Mynd Domain-Containing Protein 2 Chain: A Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Smyd2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Psumo
symmetry	Space Group: P 21 21 21	R_factor 0.186 R_Free 0.208
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.520 75.150 112.520 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	SFG, ZN	enzyme
note	3QWW is a representative structure
Gene Ontology	Chain Function Process Component A histone methyltransferase ac...
Primary reference	Crystal structures of histone and p53 methyltransferase SmyD2 reveal a conformational flexibility of the autoinhibitory C-terminal domain., Jiang Y, Sirinupong N, Brunzelle J, Yang Z, PLoS One. 2011;6(6):e21640. Epub 2011 Jun 28. PMID:21738746

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk] Biological Unit Coordinates (3qww.pdb1.gz) 78 Kb LPC: Ligand-Protein Contacts for 3QWW CSU: Contacts of Structural Units for 3QWW Structure Factors (349 Kb) Retrieve 3QWW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3QWW from S2C, [Save to disk] Re-refined 3qww structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3QWW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3QWW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3QWW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3qww_A] [3qww] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3QWW: [SET ] by SMART

Other resources with information on 3QWW

Community annotation for 3QWW at PDBWiki (http://pdbwiki.org)

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