3QYW Transferase Transferase Inhibitor date Mar 04, 2011
title Crystal Structure Of Erk2 In Complex With An Inhibitor
authors M.Gelin, S.Pochet, F.Hoh, M.Pirochi, J.F.Guichou, J.L.Ferrer, G.
compound source
Molecule: Mitogen-Activated Protein Kinase 1
Chain: A
Synonym: Map Kinase 1, Mapk 1, Ert1, Extracellular Signal-R Kinase 2, Erk-2, Map Kinase Isoform P42, P42-Mapk, Mitogen- Protein Kinase 2, Map Kinase 2, Mapk 2;
Ec: 2.7.11.24
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Brown Rat,Rat,Rats
Organism_taxid: 10116
Gene: Mapk1, Erk2, Mapk, Prkm1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.148 R_Free 0.188
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.067 70.254 60.168 90.00 108.72 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand 6PB, CME, DMS, SO4 enzyme Transferase E.C.2.7.11.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • MAP kinase activity
  • MAP kinase kinase activity


  • Primary referenceIn-plate protein crystallization, in situ ligand soaking and X-ray diffraction., le Maire A, Gelin M, Pochet S, Hoh F, Pirocchi M, Guichou JF, Ferrer JL, Labesse G, Acta Crystallogr D Biol Crystallogr. 2011 Sep;67(Pt 9):747-55. doi:, 10.1107/S0907444911023249. Epub 2011 Aug 9. PMID:21904027
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk]
  • Biological Unit Coordinates (3qyw.pdb1.gz) 130 Kb
  • LPC: Ligand-Protein Contacts for 3QYW
  • CSU: Contacts of Structural Units for 3QYW
  • Structure Factors (2170 Kb)
  • Retrieve 3QYW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3QYW from S2C, [Save to disk]
  • Re-refined 3qyw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3QYW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3QYW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3QYW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3qyw_A] [3qyw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3QYW: [S_TKc ] by SMART
  • Other resources with information on 3QYW
  • Community annotation for 3QYW at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science