3R30	Transferase Transferase Inhibitor	date	Mar 15, 2011
title	Mk2 Kinase Bound To Compound 2
authors	A.Oubrie, M.Fisher
compound		source
Molecule: Map Kinase-Activated Protein Kinase 2 Chain: A Fragment: Kinase Domain, Unp Residues 46-364 Synonym: Mapk-Activated Protein Kinase 2, Mapkap Kinase 2, Mk2; Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mapkapk2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Tuner (De3) Expression_system_vector_type: Plasmid
symmetry	Space Group: F 41 3 2	R_factor 0.279 R_Free 0.332
crystal cell	length a length b length c angle alpha angle beta angle gamma 253.297 253.297 253.297 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.20 Å
ligand	CD2 BindingDB	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structure-based lead identification of ATP-competitive MK2 inhibitors., Barf T, Kaptein A, Wilde SD, Heijden RV, Someren RV, Demont D, Schultz-Fademrecht C, Versteegh J, Zeeland MV, Seegers N, Kazemier B, Kar BV, Hoek MV, Roos JD, Klop H, Smeets R, Hofstra C, Hornberg J, Oubrie A, Bioorg Med Chem Lett. 2011 Apr 16. PMID:21565500

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk] Biological Unit Coordinates (3r30.pdb1.gz) 87 Kb Biological Unit Coordinates (3r30.pdb2.gz) 258 Kb Biological Unit Coordinates (3r30.pdb3.gz) 258 Kb LPC: Ligand-Protein Contacts for 3R30 CSU: Contacts of Structural Units for 3R30 Structure Factors (208 Kb) Retrieve 3R30 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3R30 from S2C, [Save to disk] Re-refined 3r30 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3R30 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3R30

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3R30, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3r30] [3r30_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3R30: [S_TKc ] by SMART

Other resources with information on 3R30

Community annotation for 3R30 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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