3RBQ Protein Transport Lipid Binding Protein date Mar 29, 2011
title Co-Crystal Structure Of Human Unc119 (Retina Gene 4) And An Transducin-Alpha Mimicking Peptide
authors R.Constantine, F.G.Whitby, C.P.Hill, W.Baehr
compound source
Molecule: Protein Unc-119 Homolog A
Chain: A, B, C, D, E, F
Fragment: Unp Residues 56-240
Synonym: Retinal Protein 4, Hrg4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Unc119, Rg4
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Guanine Nucleotide-Binding Protein G(T) Subunit A
Chain: G, H, I, J, K, L
Synonym: Transducin Alpha-1 Chain
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Synthesized Peptide
symmetry Space Group: P 21 21 21
R_factor 0.188 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.546 79.713 189.590 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand DAO enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceUNC119 is required for G protein trafficking in sensory neurons., Zhang H, Constantine R, Vorobiev S, Chen Y, Seetharaman J, Huang YJ, Xiao R, Montelione GT, Gerstner CD, Davis MW, Inana G, Whitby FG, Jorgensen EM, Hill CP, Tong L, Baehr W, Nat Neurosci. 2011 Jun 5. PMID:21642972
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk]
  • Biological Unit Coordinates (3rbq.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (3rbq.pdb2.gz) 34 Kb
  • Biological Unit Coordinates (3rbq.pdb3.gz) 34 Kb
  • Biological Unit Coordinates (3rbq.pdb4.gz) 34 Kb
  • Biological Unit Coordinates (3rbq.pdb5.gz) 33 Kb
  • Biological Unit Coordinates (3rbq.pdb6.gz) 33 Kb
  • Biological Unit Coordinates (3rbq.pdb7.gz) 4 Kb
  • Biological Unit Coordinates (3rbq.pdb8.gz) 4 Kb
  • Biological Unit Coordinates (3rbq.pdb9.gz) 3 Kb
  • LPC: Ligand-Protein Contacts for 3RBQ
  • CSU: Contacts of Structural Units for 3RBQ
  • Structure Factors (1202 Kb)
  • Retrieve 3RBQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RBQ from S2C, [Save to disk]
  • Re-refined 3rbq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RBQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3RBQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RBQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rbq_K] [3rbq_H] [3rbq_D] [3rbq_F] [3rbq_L] [3rbq_E] [3rbq] [3rbq_G] [3rbq_I] [3rbq_B] [3rbq_J] [3rbq_A] [3rbq_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3RBQ
  • Community annotation for 3RBQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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