3RDC	Isomerase Isomerase Inhibitor	date	Apr 01, 2011
title	Human Cyclophilin D Complexed With An Inhibitor
authors	L.Colliandre, H.Ahmed-Belkacem, Y.Bessin, J.M.Pawlotsky, J.F.Gui
compound		source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase F, Mitochondr Chain: A Fragment: Unp Residues 43-207 Synonym: Ppiase F, Cyclophilin F, Rotamase F Ec: 5.2.1.8 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ppif, Cyp3 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 41 21 2	R_factor 0.205 R_Free 0.270
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.445 56.445 86.995 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.94 Å
ligand	EA4	enzyme	Isomerase E.C.5.2.1.8 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Combining `dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography., Gelin M, Delfosse V, Allemand F, Hoh F, Sallaz-Damaz Y, Pirocchi M, Bourguet W, Ferrer JL, Labesse G, Guichou JF, Acta Crystallogr D Biol Crystallogr. 2015 Aug 1;71(Pt 8):1777-87. doi:, 10.1107/S1399004715010342. Epub 2015 Jul 31. PMID:26249358

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk] Biological Unit Coordinates (3rdc.pdb1.gz) 29 Kb LPC: Ligand-Protein Contacts for 3RDC CSU: Contacts of Structural Units for 3RDC Structure Factors (162 Kb) Retrieve 3RDC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3RDC from S2C, [Save to disk] Re-refined 3rdc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3RDC, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3rdc] [3rdc_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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