3REE Metal Binding Protein date Apr 04, 2011
title Crystal Structure Of Mitoneet
authors M.O.Funk, W.Arif, S.Xu, T.C.Mueser
compound source
Molecule: Cdgsh Iron-Sulfur Domain-Containing Protein 1
Chain: A
Synonym: Mitoneet
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cisd1, C10orf70, Zcd1, Mds029
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 41 2 2
R_factor 0.202 R_Free 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.640 58.640 177.610 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.76 Å
ligand FES enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceComplexes of the Outer Mitochondrial Membrane Protein mitoNEET with Resveratrol-3-sulfate., Arif W, Xu S, Isailovic D, Geldenhuys WJ, Carroll RT, Funk MO, Biochemistry. 2011 May 17. PMID:21591687
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (3ree.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 3REE
  • CSU: Contacts of Structural Units for 3REE
  • Structure Factors (236 Kb)
  • Retrieve 3REE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3REE from S2C, [Save to disk]
  • Re-refined 3ree structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3REE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3REE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3REE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ree_A] [3ree]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3REE: [ZnF_CDGSH ] by SMART
    • Other resources with information on 3REE
  • Community annotation for 3REE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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