3RG0 Chaperone date Apr 07, 2011
title Structural And Functional Relationships Between The Lectin A Domains Of Calreticulin
authors G.Kozlov, C.L.Pocanschi, U.Brockmeier, D.B.Williams, K.Gehring
compound source
Molecule: Calreticulin
Chain: A
Fragment: Lectin Domain With Partially Truncated Arm Domain Residues 18-238 And 273-284;
Synonym: Crp55, Calregulin, Endoplasmic Reticulum Resident 60, Erp60, Hacbp;
Engineered: Yes
Mutation: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Calr
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet29a
symmetry Space Group: P 21 21 21
R_factor 0.234 R_Free 0.286
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.062 71.701 108.386 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.57 Å
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional relationships between the lectin and arm domains of calreticulin., Pocanschi CL, Kozlov G, Brockmeier U, Brockmeier A, Williams DB, Gehring K, J Biol Chem. 2011 Jun 7. PMID:21652723
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (3rg0.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 3RG0
  • CSU: Contacts of Structural Units for 3RG0
  • Structure Factors (161 Kb)
  • Retrieve 3RG0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RG0 from S2C, [Save to disk]
  • Re-refined 3rg0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RG0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3RG0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RG0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rg0_A] [3rg0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3RG0
  • Community annotation for 3RG0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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