3RN3 Hydrolase (Nucleic Acid,Rna) date Oct 30, 1991
title Segmented Anisotropic Refinement Of Bovine Ribonuclease A By Application Of The Rigid-Body Tls Model
authors B.Howlin, D.S.Moss, G.W.Harris, R.A.Palmer
compound source
Molecule: Ribonuclease A
Chain: A
Ec: 3.1.27.5
Engineered: Yes
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Pancreas
symmetry Space Group: P 1 21 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
30.450 38.369 53.215 90.00 105.96 90.00
method X-Ray Diffractionresolution 1.45 Å
ligand SO4 enzyme Hydrolase E.C.3.1.27.5 BRENDA
note 3RN3 supersedes 1RN3
related structures by homologous chain: 1N1X, 2RAT
Gene
Ontology
ChainFunctionProcessComponent
A
  • ribonuclease A activity


    • Primary referenceSegmented anisotropic refinement of bovine ribonuclease A by the application of the rigid-body TLS model., Howlin B, Moss DS, Harris GW, Acta Crystallogr A 1989 Dec 1;45 ( Pt 12):851-61. PMID:2619965
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (3rn3.pdb1.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 3RN3
  • CSU: Contacts of Structural Units for 3RN3
  • Likely Quarternary Molecular Structure file(s) for 3RN3
  • Structure Factors (206 Kb)
  • Retrieve 3RN3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RN3 from S2C, [Save to disk]
  • Re-refined 3rn3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3RN3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3RN3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 3RN3 from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RN3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3rn3__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rn3] [3rn3_A]
  • SWISS-PROT database: [P61823]
  • Domain organization of [RNAS1_BOVIN] by SWISSPFAM
  • Domain found in 3RN3: [RNAse_Pc ] by SMART
    • Other resources with information on 3RN3
  • Community annotation for 3RN3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 3RN3 from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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