3RO2 Protein Binding date Apr 25, 2011
title Structures Of The Lgnnuma Complex
authors Y.Shang, Z.Wei
compound source
Molecule: G-Protein-Signaling Modulator 2
Chain: A
Fragment: Tpr Domain, Unp Residues 22-357
Synonym: Pins Homolog
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Gpsm2, Lgn, Pins
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a

Molecule: Peptide Of Nuclear Mitotic Apparatus Protein 1
Chain: B
Fragment: Unp Residues 1899-1926
Synonym: Numa Protein, Sp-H Antigen
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: This Sequence Occurs Naturally In Humans.
symmetry Space Group: P 61 2 2
R_factor 0.215 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.305 91.305 178.376 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceLGN/mInsc and LGN/NuMA complex structures suggest distinct functions in asymmetric cell division for the Par3/mInsc/LGN and Galphai/LGN/NuMA pathways., Zhu J, Wen W, Zheng Z, Shang Y, Wei Z, Xiao Z, Pan Z, Du Q, Wang W, Zhang M, Mol Cell. 2011 Aug 5;43(3):418-31. PMID:21816348
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (3ro2.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 3RO2
  • CSU: Contacts of Structural Units for 3RO2
  • Structure Factors (298 Kb)
  • Retrieve 3RO2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RO2 from S2C, [Save to disk]
  • Re-refined 3ro2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RO2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3RO2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3RO2, from MSDmotif at EBI
  • Fold representative 3ro2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ro2_A] [3ro2] [3ro2_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Alignments of the sequence of 3RO2 with the sequences similar proteins can be viewed for 3RO2's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 3RO2
  • Community annotation for 3RO2 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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