3RO2 Protein Binding date Apr 25, 2011
title Structures Of The Lgnnuma Complex
authors Y.Shang, Z.Wei
compound source
Molecule: G-Protein-Signaling Modulator 2
Chain: A
Fragment: Tpr Domain, Unp Residues 22-357
Synonym: Pins Homolog
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Gpsm2, Lgn, Pins
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a

Molecule: Peptide Of Nuclear Mitotic Apparatus Protein 1
Chain: B
Fragment: Unp Residues 1899-1926
Synonym: Numa Protein, Sp-H Antigen
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: This Sequence Occurs Naturally In Humans.
symmetry Space Group: P 61 2 2
R_factor 0.215 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.305 91.305 178.376 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand GOL enzyme
Primary referenceLGN/mInsc and LGN/NuMA complex structures suggest distinct functions in asymmetric cell division for the Par3/mInsc/LGN and Galphai/LGN/NuMA pathways., Zhu J, Wen W, Zheng Z, Shang Y, Wei Z, Xiao Z, Pan Z, Du Q, Wang W, Zhang M, Mol Cell. 2011 Aug 5;43(3):418-31. PMID:21816348
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (3ro2.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 3RO2
  • CSU: Contacts of Structural Units for 3RO2
  • Structure Factors (298 Kb)
  • Retrieve 3RO2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RO2 from S2C, [Save to disk]
  • Re-refined 3ro2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RO2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3RO2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3RO2, from MSDmotif at EBI
  • Fold representative 3ro2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ro2_A] [3ro2] [3ro2_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3RO2: [TPR ] by SMART
  • Other resources with information on 3RO2
  • Community annotation for 3RO2 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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