3RR5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceATP-dependent DNA ligase from Thermococcus sp. 1519 displays a new arrangement of the OB-fold domain., Petrova T, Bezsudnova EY, Boyko KM, Mardanov AV, Polyakov KM, Volkov VV, Kozin M, Ravin NV, Shabalin IG, Skryabin KG, Stekhanova TN, Kovalchuk MV, Popov VO, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Dec 1;68(Pt 12):1440-7., doi: 10.1107/S1744309112043394. Epub 2012 Nov 14. PMID:23192021
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (3rr5.pdb1.gz) 77 Kb
  • LPC: Ligand-Protein Contacts for 3RR5
  • CSU: Contacts of Structural Units for 3RR5
  • Structure Factors (232 Kb)
  • Retrieve 3RR5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RR5 from S2C, [Save to disk]
  • Re-refined 3rr5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RR5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rr5] [3rr5_A]
  • SWISS-PROT database:

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