3RS9	Lyase	date	May 02, 2011
title	Crystal Structure Of Tm0922, A Fusion Of A Domain Of Unknown And Adpatp-Dependent Nad(P)H-Hydrate Dehydratase From Ther Maritima In Complex With P1,P3-Di(Adenosine-5') Triphosphat
authors	I.A.Shumilin, M.Cymborowski, S.A.Lesley, W.Minor
compound		source
Molecule: Putative Uncharacterized Protein Chain: A Ec: 4.2.1.93 Engineered: Yes		Organism_scientific: Thermotoga Maritima Organism_taxid: 243274 Strain: Msb8 Gene: Tm0922, Tm_0922 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmh1
Molecule: Unknown Peptide, Probably From Expression Host Chain: B		Organism_scientific: Escherichia Coli Organism_taxid: 469008 Strain: Bl21(De3) Other_details: Unknown Peptide, Probably From Expression Ho
symmetry	Space Group: I 4 2 2	R_factor 0.158 R_Free 0.193
crystal cell	length a length b length c angle alpha angle beta angle gamma 122.073 122.073 155.292 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	BA3, GOL, K, MG	enzyme	Lyase E.C.4.2.1.93 BRENDA
Gene	TM
Gene Ontology	Chain Function Process Component A
Primary reference	Identification of Unknown Protein Function Using Metabolite Cocktail Screening., Shumilin IA, Cymborowski M, Chertihin O, Jha KN, Herr JC, Lesley SA, Joachimiak A, Minor W, Structure. 2012 Aug 28. PMID:22940582

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk] Biological Unit Coordinates (3rs9.pdb1.gz) 1226 Kb LPC: Ligand-Protein Contacts for 3RS9 CSU: Contacts of Structural Units for 3RS9 Structure Factors (528 Kb) Retrieve 3RS9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3RS9 from S2C, [Save to disk] Re-refined 3rs9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3RS9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3RS9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3RS9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3rs9] [3rs9_A] [3rs9_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3RS9

Community annotation for 3RS9 at PDBWiki (http://pdbwiki.org)

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