3RZ1 Lyase date May 11, 2011
title Fluoroalkyl And Alkyl Chains Have Similar Hydrophobicities I To The Hydrophobic Wall Of Carbonic Anhydrase
authors P.W.Snyder, S.Bai, A.Heroux, G.W.Whitesides
compound source
Molecule: Carbonic Anhydrase 2
Chain: B
Synonym: Carbonate Dehydratase II, Carbonic Anhydrase C, Ca Carbonic Anhydrase II, Ca-II;
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 1 21 1
R_factor 0.127 R_Free 0.177
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.275 41.682 72.334 90.00 104.66 90.00
method X-Ray Diffractionresolution 1.51 Å
ligand DMS, RZ1, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceFluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the ''Hydrophobic Wall'' of Carbonic Anhydrase., Mecinovic J, Snyder PW, Mirica KA, Bai S, Mack ET, Kwant RL, Moustakas DT, Heroux A, Whitesides GM, J Am Chem Soc. 2011 Jul 26. PMID:21790183
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (3rz1.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 3RZ1
  • CSU: Contacts of Structural Units for 3RZ1
  • Structure Factors (844 Kb)
  • Retrieve 3RZ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RZ1 from S2C, [Save to disk]
  • Re-refined 3rz1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RZ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3RZ1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RZ1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rz1_B] [3rz1]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3RZ1: [Carb_anhydrase ] by SMART
  • Other resources with information on 3RZ1
  • Community annotation for 3RZ1 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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