3S4E	Hydrolase	date	May 19, 2011
title	Crystal Structrue Of A Novel Mitogen-Activated Protein Kinas Phosphatase, Skrp1
authors	C.H.Wei, S.Y.Ryu, Y.H.Jeon, D.G.Jeong, S.J.Kim, S.E.Ryu
compound		source
Molecule: Dual Specificity Protein Phosphatase 19 Chain: A Fragment: Ptp-Loop (Unp Residues 65-206) Synonym: Dual Specificity Phosphatase Ts-Dsp1, Low Molecula Dual Specificity Phosphatase 3, Lmw-Dsp3, Protein Phosphata Stress-Activated Protein Kinase Pathway-Regulating Phosphat Sapk Pathway-Regulating Phosphatase 1; Ec: 3.1.3.16, 3.1.3.48 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dusp19, Dusp17, Lmwdsp3, Skrp1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-28a
symmetry	Space Group: P 21 21 21	R_factor 0.151 R_Free 0.181
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.852 50.313 57.872 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.26 Å
ligand	PO4, SO4	enzyme	Hydrolase E.C.3.1.3.16 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of a novel mitogen-activated protein kinase phosphatase, SKRP1., Wei CH, Ryu SY, Jeon YH, Yoon MY, Jeong DG, Kim SJ, Ryu SE, Proteins. 2011 Nov;79(11):3242-6. doi: 10.1002/prot.23156. Epub 2011 Aug 30. PMID:21989941

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk] Biological Unit Coordinates (3s4e.pdb1.gz) 26 Kb LPC: Ligand-Protein Contacts for 3S4E CSU: Contacts of Structural Units for 3S4E Structure Factors (504 Kb) Retrieve 3S4E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3S4E from S2C, [Save to disk] Re-refined 3s4e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3S4E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3S4E

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3S4E, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3s4e_A] [3s4e] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3S4E: [DSPc ] by SMART

Other resources with information on 3S4E

Community annotation for 3S4E at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---