3S5O date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, K, KPI enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and Biochemical Studies of Human 4-hydroxy-2-oxoglutarate Aldolase: Implications for Hydroxyproline Metabolism in Primary Hyperoxaluria., Riedel TJ, Johnson LC, Knight J, Hantgan RR, Holmes RP, Lowther WT, PLoS One. 2011;6(10):e26021. Epub 2011 Oct 6. PMID:21998747
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (3s5o.pdb1.gz) 194 Kb
  • LPC: Ligand-Protein Contacts for 3S5O
  • CSU: Contacts of Structural Units for 3S5O
  • Structure Factors (675 Kb)
  • Retrieve 3S5O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3S5O from S2C, [Save to disk]
  • Re-refined 3s5o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3S5O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3s5o] [3s5o_A]
  • SWISS-PROT database:
  • Domain found in 3S5O: [DHDPS ] by SMART

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