3S67 Hydrolase Inhibitor date May 25, 2011
title Crystal Structure Of V57p Mutant Of Human Cystatin C
authors M.Orlikowska, A.Szymanska, D.Borek, Z.Otwinowski, P.Skowron, E.Ja
compound source
Molecule: Cystatin-C
Chain: A
Synonym: Cystatin-3, Gamma-Trace, Neuroendocrine Basic Poly Post-Gamma-Globulin;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cst3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: C41
Expression_system_plasmid: Phd313
symmetry Space Group: I 4 3 2
R_factor 0.187 R_Free 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
140.135 140.135 140.135 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.26 Å
ligand ACT, CL, IMD, PEG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • cysteine-type endopeptidase ...


  • Primary referenceStructural characterization of V57D and V57P mutants of human cystatin C, an amyloidogenic protein., Orlikowska M, Szymanska A, Borek D, Otwinowski Z, Skowron P, Jankowska E, Acta Crystallogr D Biol Crystallogr. 2013 Apr;69(Pt 4):577-86. doi:, 10.1107/S0907444912051657. Epub 2013 Mar 14. PMID:23519666
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (3s67.pdb1.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 3S67
  • CSU: Contacts of Structural Units for 3S67
  • Structure Factors (173 Kb)
  • Retrieve 3S67 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3S67 from S2C, [Save to disk]
  • Re-refined 3s67 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3S67, from MSDmotif at EBI
  • Fold representative 3s67 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3s67_A] [3s67]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3S67: [CY ] by SMART
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