3S7F	Transferase	date	May 26, 2011
title	Structural Basis Of Substrate Methylation And Inhibition Of
authors	A.D.Ferguson
compound		source
Molecule: N-Lysine Methyltransferase Smyd2 Chain: A Synonym: Hskm-B, Histone Methyltransferase Smyd2, Lysine N- Methyltransferase 3c, Set And Mynd Domain-Containing Protei Ec: 2.1.1.-, 2.1.1.43 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Smyd2, Kmt3c Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: P53 Peptide Chain: I Engineered: Yes		Synthetic: Yes
symmetry	Space Group: I 4	R_factor 0.172 R_Free 0.201
crystal cell	length a length b length c angle alpha angle beta angle gamma 156.413 156.413 52.895 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.85 Å
ligand	BU3, SAM, ZN	enzyme	Transferase E.C.2.1.1 BRENDA
Gene Ontology	Chain Function Process Component A histone methyltransferase ac...
Primary reference	Structural Basis of Substrate Methylation and Inhibition of SMYD2., Ferguson AD, Larsen NA, Howard T, Pollard H, Green I, Grande C, Cheung T, Garcia-Arenas R, Cowen S, Wu J, Godin R, Chen H, Keen N, Structure. 2011 Jul 20. PMID:21782458

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk] Biological Unit Coordinates (3s7f.pdb1.gz) 147 Kb LPC: Ligand-Protein Contacts for 3S7F CSU: Contacts of Structural Units for 3S7F Structure Factors (691 Kb) Retrieve 3S7F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3S7F from S2C, [Save to disk] Re-refined 3s7f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3S7F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3S7F

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3S7F, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3s7f_A] [3s7f_I] [3s7f] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3S7F: [SET ] by SMART

Other resources with information on 3S7F

Community annotation for 3S7F at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---