3S92 Unknown Function date May 31, 2011
title Crystal Structure Of The Second Bromodomain Of Human Brd3 In With The Inhibitor Jq1
authors P.Filippakopoulos, S.Picaud, J.Qi, T.Keates, I.Felletar, O.Fedoro J.Muniz, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, J.Weigelt, C. J.E.Bradner, S.Knapp, Structural Genomics Consortium (Sgc)
compound source
Molecule: Bromodomain-Containing Protein 3
Chain: A
Synonym: Ring3-Like Protein
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brd3, Kiaa0043, Ring3l
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-R3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 2 2 21
R_factor 0.131 R_Free 0.187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.360 38.020 85.790 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.36 Å
ligand EDO, JQ1 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (3s92.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 3S92
  • CSU: Contacts of Structural Units for 3S92
  • Structure Factors (341 Kb)
  • Retrieve 3S92 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3S92 from S2C, [Save to disk]
  • Re-refined 3s92 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3S92 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3S92
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3S92, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3s92_A] [3s92]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3S92: [BROMO ] by SMART
    • Other resources with information on 3S92
  • Community annotation for 3S92 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science