3S9G Transcription date Jun 01, 2011
title Structure Of Human Hexim1 (Delta Stammer) Coiled Coil Domain
authors J.M.Bigalke, W.Blankenfeldt, M.Geyer
compound source
Molecule: Protein Hexim1
Chain: A, B
Fragment: Cyclin T-Binding Domain
Synonym: Cardiac Lineage Protein 1, Estrogen Down-Regulated Protein, Hexamethylene Bis-Acetamide-Inducible Protein 1, M Quatre Protein 1;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Clp1, Edg1, Hexim1, His1, Maq1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pproex-Hta
symmetry Space Group: I 4
R_factor 0.236 R_Free 0.296
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.770 70.770 90.960 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and Dynamics of a Stabilized Coiled-Coil Domain in the P-TEFb Regulator Hexim1., Bigalke JM, Dames SA, Blankenfeldt W, Grzesiek S, Geyer M, J Mol Biol. 2011 Oct 18. PMID:22033481
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (3s9g.pdb1.gz) 54 Kb
  • CSU: Contacts of Structural Units for 3S9G
  • Structure Factors (200 Kb)
  • Retrieve 3S9G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3S9G from S2C, [Save to disk]
  • Re-refined 3s9g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3S9G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3S9G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3S9G, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3s9g_B] [3s9g_A] [3s9g]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3S9G
  • Community annotation for 3S9G at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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