3SA0 Transferase Transferase Inhibitor date Jun 02, 2011
title Complex Of Erk2 With Norathyriol
authors I.Kurinov, M.Malakhova
compound source
Molecule: Mitogen-Activated Protein Kinase 1
Chain: A
Synonym: Map Kinase 1, Mapk 1, Ert1, Extracellular Signal-R Kinase 2, Erk-2, Map Kinase Isoform P42, P42-Mapk, Mitogen- Protein Kinase 2, Map Kinase 2, Mapk 2;
Ec: 2.7.11.24
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Erk2, Mapk1, Prkm1, Prkm2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21-Codonplus (De3)-Ripl
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a
symmetry Space Group: P 1 21 1
R_factor 0.164 R_Free 0.200
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.687 69.411 59.721 90.00 108.99 90.00
method X-Ray Diffractionresolution 1.59 Å
ligand CME, NRA, SO4 enzyme Transferase E.C.2.7.11.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • chemical synaptic transmissi...

  • Primary referenceNorathyriol suppresses skin cancers induced by solar ultraviolet radiation by targeting ERK kinases., Li J, Malakhova M, Mottamal M, Reddy K, Kurinov I, Carper A, Langfald A, Oi N, Kim MO, Zhu F, Sosa CP, Zhou K, Bode AM, Dong Z, Cancer Res. 2011 Nov 14. PMID:22084399
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (187 Kb) [Save to disk]
  • Biological Unit Coordinates (3sa0.pdb1.gz) 181 Kb
  • LPC: Ligand-Protein Contacts for 3SA0
  • CSU: Contacts of Structural Units for 3SA0
  • Structure Factors (555 Kb)
  • Retrieve 3SA0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SA0 from S2C, [Save to disk]
  • Re-refined 3sa0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3SA0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3SA0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3SA0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3sa0_A] [3sa0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3SA0: [S_TKc ] by SMART
  • Other resources with information on 3SA0
  • Community annotation for 3SA0 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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