3SCG Metal Binding Protein date Jun 07, 2011
title Fe(II)-Hppe With R-Hpp
authors C.L.Drennan
compound source
Molecule: Epoxidase
Chain: A, B, C
Engineered: Yes
Organism_scientific: Streptomyces Wedmorensis
Organism_taxid: 43759
Gene: Fom4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppl001
symmetry Space Group: P 42 21 2
R_factor 0.217 R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
111.570 111.570 151.334 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand FE2, TB6 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructural Basis of Regiospecificity of a Mononuclear Iron Enzyme in Antibiotic Fosfomycin Biosynthesis., Yun D, Dey M, Higgins LJ, Yan F, Liu HW, Drennan CL, J Am Chem Soc. 2011 Jun 30. PMID:21682308
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (3scg.pdb1.gz) 118 Kb
  • Biological Unit Coordinates (3scg.pdb2.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 3SCG
  • CSU: Contacts of Structural Units for 3SCG
  • Structure Factors (234 Kb)
  • Retrieve 3SCG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SCG from S2C, [Save to disk]
  • Re-refined 3scg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3SCG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3SCG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3SCG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3scg_C] [3scg_A] [3scg] [3scg_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3SCG: [HTH_XRE ] by SMART
  • Other resources with information on 3SCG
  • Community annotation for 3SCG at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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