3SDI | Hydrolase Hydrolase Inhibitor | date | Jun 09, 2011 |
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title | Structure Of Yeast 20s Open-Gate Proteasome With Compound 20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
authors | M.D.Sintchak | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
compound | source | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Y7 Chain: A, O Synonym: Macropain Subunit Y7, Multicatalytic Endopeptidase Subunit Y7, Proteinase Ysce Subunit 7; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Y13 Chain: B, P Synonym: Macropain Subunit Y13, Multicatalytic Endopeptidas Subunit Y13, Proteinase Ysce Subunit 13; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Pre6 Chain: C, Q Synonym: Macropain Subunit Pre6, Multicatalytic Endopeptida Subunit Pre6, Proteinase Ysce Subunit Pre6; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Pup2 Chain: D, R Synonym: Macropain Subunit Pup2, Multicatalytic Endopeptida Subunit Pup2, Proteinase Ysce Subunit Pup2; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Pre5 Chain: E, S Synonym: Macropain Subunit Pre5, Multicatalytic Endopeptida Subunit Pre5, Proteinase Ysce Subunit Pre5; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component C1 Chain: F, T Synonym: Macropain Subunit C1, Multicatalytic Endopeptidase Subunit C1, Proteinase Ysce Subunit 1; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component C7-Alpha Chain: G, U Synonym: Macropain Subunit C7-Alpha, Multicatalytic Endopep Complex C7, Proteasome Component Y8, Proteinase Ysce Subuni Suppressor Protein; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Pup1 Chain: H, V Synonym: Macropain Subunit Pup1, Multicatalytic Endopeptida Subunit Pup1, Proteinase Ysce Subunit Pup1; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Pup3 Chain: I, W Synonym: Macropain Subunit Pup3, Multicatalytic Endopeptida Subunit Pup3; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component C11 Chain: J, X Synonym: Macropain Subunit C11, Multicatalytic Endopeptidas Subunit C11, Proteinase Ysce Subunit 11; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Pre2 Chain: K, Y Synonym: Macropain Subunit Pre2, Multicatalytic Endopeptida Subunit Pre2, Proteinase Ysce Subunit Pre2; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component C5 Chain: L, Z Synonym: Multicatalytic Endopeptidase Complex Subunit C5 Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Pre4 Chain: M, 1 Synonym: Macropain Subunit Pre4, Multicatalytic Endopeptida Subunit Pre4, Proteinase Ysce Subunit Pre4; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule: Proteasome Component Pre3 Chain: N, 2 Synonym: Macropain Subunit Pre3, Multicatalytic Endopeptida Subunit Pre3, Proteinase Ysce Subunit Pre3; Ec: 3.4.25.1 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
symmetry | Space Group: P 1 21 1 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.65 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ligand | 3SD, MES, MG | enzyme | Hydrolase E.C.3.4.25.1 BRENDA | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology |
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Primary reference | Optimization of a series of dipeptides with a P3 threonine residue as non-covalent inhibitors of the chymotrypsin-like activity of the human 20S proteasome., Blackburn C, Barrett C, Blank JL, Bruzzese FJ, Bump N, Dick LR, Fleming P, Garcia K, Hales P, Hu Z, Jones M, Liu JX, Sappal DS, Sintchak MD, Tsu C, Gigstad KM, Bioorg Med Chem Lett. 2010 Nov 15;20(22):6581-6. Epub 2010 Sep 15. PMID:20875739 |
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