3SDM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SEP, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
E, A, G, F, B, C, D


Primary referenceCofactor-mediated conformational control in the bifunctional kinase/RNase Ire1., Korennykh AV, Egea PF, Korostelev AA, Finer-Moore J, Stroud RM, Zhang C, Shokat KM, Walter P, BMC Biol. 2011 Jul 6;9(1):48. PMID:21729334
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (486 Kb) [Save to disk]
  • Biological Unit Coordinates (3sdm.pdb1.gz) 952 Kb
  • Biological Unit Coordinates (3sdm.pdb2.gz) 141 Kb
  • Biological Unit Coordinates (3sdm.pdb3.gz) 140 Kb
  • Biological Unit Coordinates (3sdm.pdb4.gz) 141 Kb
  • Biological Unit Coordinates (3sdm.pdb5.gz) 141 Kb
  • LPC: Ligand-Protein Contacts for 3SDM
  • CSU: Contacts of Structural Units for 3SDM
  • Structure Factors (82 Kb)
  • Retrieve 3SDM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SDM from S2C, [Save to disk]
  • Re-refined 3sdm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3SDM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3sdm] [3sdm_A] [3sdm_B] [3sdm_C] [3sdm_D] [3sdm_E] [3sdm_F] [3sdm_G]
  • SWISS-PROT database:
  • Domains found in 3SDM: [PUG] [STYKc ] by SMART

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