3SDY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, FUC, MAN, NAG, PCA, SO4 enzyme
note 3SDY (Molecule of the Month:pdb170)
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceA Highly Conserved Neutralizing Epitope on Group 2 Influenza A Viruses., Ekiert DC, Friesen RH, Bhabha G, Kwaks T, Jongeneelen M, Yu W, Ophorst C, Cox F, Korse HJ, Brandenburg B, Vogels R, Brakenhoff JP, Kompier R, Koldijk MH, Cornelissen LA, Poon LL, Peiris M, Koudstaal W, Wilson IA, Goudsmit J, Science. 2011 Jul 7. PMID:21737702
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (464 Kb) [Save to disk]
  • Biological Unit Coordinates (3sdy.pdb1.gz) 1351 Kb
  • LPC: Ligand-Protein Contacts for 3SDY
  • CSU: Contacts of Structural Units for 3SDY
  • Structure Factors (811 Kb)
  • Retrieve 3SDY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SDY from S2C, [Save to disk]
  • Re-refined 3sdy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3SDY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3sdy] [3sdy_A] [3sdy_B] [3sdy_H] [3sdy_L]
  • SWISS-PROT database:
  • Domains found in 3SDY: [IG_like] [IGv ] by SMART

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