3SMP Transferase date Jun 28, 2011
title Monoclinic Crystal Structure Of Human Pantothenate Kinase 1
authors X.Guan, W.Tempel, B.Hong, A.K.Wernimont, C.H.Arrowsmith, A.M.Edwa C.Bountra, J.Weigelt, H.Park, Structural Genomics Consortium (
compound source
Molecule: Pantothenate Kinase 1
Chain: A, B
Fragment: Unp Residues 231-597
Synonym: Hpank, Hpank1, Pantothenic Acid Kinase 1
Ec: 2.7.1.33
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pank1, Pank
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Pet28-Lic
Expression_system_plasmid: Bl21-V2r
symmetry Space Group: C 1 2 1
R_factor 0.209 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
152.680 66.680 88.160 90.00 92.20 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand ACO, ARS, CL, UNX enzyme Transferase E.C.2.7.1.33 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (245 Kb) [Save to disk]
  • Biological Unit Coordinates (3smp.pdb1.gz) 238 Kb
  • LPC: Ligand-Protein Contacts for 3SMP
  • CSU: Contacts of Structural Units for 3SMP
  • Structure Factors (1041 Kb)
  • Retrieve 3SMP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SMP from S2C, [Save to disk]
  • Re-refined 3smp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3SMP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3SMP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3SMP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3smp_A] [3smp_B] [3smp]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3SMP
  • Community annotation for 3SMP at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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