3SMZ	Rna Binding Protein	date	Jun 28, 2011
title	Human Raver1 Rrm1-3 Domains (Residues 39-320)
authors	E.S.Rangarajan, J.H.Lee, T.Izard
compound		source
Molecule: Ribonucleoprotein Ptb-Binding 1 Chain: A Fragment: Tandem Rrm Domains (Unp Residues 39-320) Synonym: Protein Raver-1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Kiaa1978, Raver1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: P 65	R_factor 0.185 R_Free 0.233
crystal cell	length a length b length c angle alpha angle beta angle gamma 104.020 104.020 50.420 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.99 Å
ligand	SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Apo raver1 structure reveals distinct RRM domain orientations., Rangarajan ES, Lee JH, Izard T, Protein Sci. 2011 Jun 1. doi: 10.1002/pro.664. PMID:21633983

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk] Biological Unit Coordinates (3smz.pdb1.gz) 97 Kb LPC: Ligand-Protein Contacts for 3SMZ CSU: Contacts of Structural Units for 3SMZ Structure Factors (782 Kb) Retrieve 3SMZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3SMZ from S2C, [Save to disk] Re-refined 3smz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SMZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3SMZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3SMZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3smz_A] [3smz] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3SMZ: [RRM ] by SMART

Other resources with information on 3SMZ

Community annotation for 3SMZ at PDBWiki (http://pdbwiki.org)

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