3SN6 Signaling Protein Hydrolase date Jun 28, 2011
title Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protei
authors S.G.F.Rasmussen, B.T.Devree, Y.Zou, A.C.Kruse, K.Y.Chung, T.S.Kob F.S.Thian, P.S.Chae, E.Pardon, D.Calinski, J.M.Mathiesen, S.T.A. J.A.Lyons, M.Caffrey, S.H.Gellman, J.Steyaert, G.Skiniotis, W.I. R.K.Sunahara, B.K.Kobilka
compound source
Molecule: Guanine Nucleotide-Binding Protein G(S) Subunit A Isoforms Short;
Chain: A
Synonym: Adenylate Cyclase-Stimulating G Alpha Protein
Engineered: Yes
Mutation: Yes
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Gene: Gnas, Gnas1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(T) Beta-1;
Chain: B
Synonym: Transducin Beta Chain 1
Engineered: Yes
Mutation: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Gene: Gnb1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(O) Gamma-2;
Chain: G
Synonym: G Gamma-I
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Gene: Gng2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Endolysin,Beta-2 Adrenergic Receptor
Chain: R
Synonym: Lysis Protein,Lysozyme,Muramidase,Beta-2 Adrenorec Beta-2 Adrenoceptor;
Ec: 3.2.1.17
Engineered: Yes
Mutation: Yes

Organism_scientific: Enterobacteria Phage T4, Homo Sapiens
Organism_common: Human
Organism_taxid: 10665, 9606
Gene: Adrb2, Adrb2r, B2ar
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Camelid Antibody Vhh Fragment
Chain: N
Engineered: Yes

Organism_scientific: Lama Glama
Organism_taxid: 9844
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.226 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
119.339 64.555 131.240 90.00 91.67 90.00
method X-Ray Diffractionresolution 3.20 Å
ligand P0G enzyme Hydrolase E.C.3.2.1.17 BRENDA
subcellular loc. Membrane localization by OPM: Eukaryotic plasma membrane
extracellular side
cytoplasmic side
Gene
Ontology
ChainFunctionProcessComponent
A


B


G


R


Primary referenceCrystal structure of the beta2 adrenergic receptor-Gs protein complex., Rasmussen SG, DeVree BT, Zou Y, Kruse AC, Chung KY, Kobilka TS, Thian FS, Chae PS, Pardon E, Calinski D, Mathiesen JM, Shah ST, Lyons JA, Caffrey M, Gellman SH, Steyaert J, Skiniotis G, Weis WI, Sunahara RK, Kobilka BK, Nature. 2011 Jul 19;477(7366):549-55. doi: 10.1038/nature10361. PMID:21772288
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (449 Kb) [Save to disk]
  • Biological Unit Coordinates (3sn6.pdb1.gz) 436 Kb
  • LPC: Ligand-Protein Contacts for 3SN6
  • CSU: Contacts of Structural Units for 3SN6
  • Structure Factors (259 Kb)
  • Retrieve 3SN6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SN6 from S2C, [Save to disk]
  • Re-refined 3sn6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3SN6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3SN6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3SN6, from MSDmotif at EBI
  • Fold representative 3sn6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3sn6_B] [3sn6] [3sn6_N] [3sn6_R] [3sn6_G] [3sn6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3SN6: [GGL] [G_alpha] [G_gamma] [IGv] [WD40 ] by SMART
  • Other resources with information on 3SN6
  • Community annotation for 3SN6 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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