3SOA Transferase Transferase Inhibitor date Jun 30, 2011
title Full-Length Human Camkii
authors L.H.Chao, J.Kuriyan
compound source
Molecule: Calciumcalmodulin-Dependent Protein Kinase Type Alpha With A Beta 7 Linker;
Chain: A
Synonym: Cam Kinase II Subunit Alpha, Camk-II Subunit Alpha Kinase II Subunit Beta 7, Camk-II Subunit Beta 7;
Ec: 2.7.11.17
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Camk2a, Camka, Kiaa0968, Camk2b, Camkb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psmt3
symmetry Space Group: P 6 2 2
R_factor 0.273 R_Free 0.327
crystal
cell
length a length b length c angle alpha angle beta angle gamma
155.720 155.720 106.160 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.55 Å
ligand DB8 BindingDB enzyme Transferase E.C.2.7.11.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA Mechanism for Tunable Autoinhibition in the Structure of a Human Ca(2+)/Calmodulin- Dependent Kinase II Holoenzyme., Chao LH, Stratton MM, Lee IH, Rosenberg OS, Levitz J, Mandell DJ, Kortemme T, Groves JT, Schulman H, Kuriyan J, Cell. 2011 Sep 2;146(5):732-45. PMID:21884935
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk]
  • Biological Unit Coordinates (3soa.pdb1.gz) 1856 Kb
  • LPC: Ligand-Protein Contacts for 3SOA
  • CSU: Contacts of Structural Units for 3SOA
  • Structure Factors (50 Kb)
  • Retrieve 3SOA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SOA from S2C, [Save to disk]
  • Re-refined 3soa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3SOA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3SOA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3SOA, from MSDmotif at EBI
  • Fold representative 3soa from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3soa_A] [3soa]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3SOA: [S_TKc ] by SMART
  • Other resources with information on 3SOA
  • Community annotation for 3SOA at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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