3SOA Transferase Transferase Inhibitor date Jun 30, 2011
title Full-Length Human Camkii
authors L.H.Chao, J.Kuriyan
compound source
Molecule: Calciumcalmodulin-Dependent Protein Kinase Type Alpha With A Beta 7 Linker;
Chain: A
Synonym: Cam Kinase II Subunit Alpha, Camk-II Subunit Alpha Kinase II Subunit Beta 7, Camk-II Subunit Beta 7;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Camk2a, Camka, Kiaa0968, Camk2b, Camkb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psmt3
symmetry Space Group: P 6 2 2
R_factor 0.273 R_Free 0.327
length a length b length c angle alpha angle beta angle gamma
155.720 155.720 106.160 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.55 Å
ligand DB8 BindingDB enzyme Transferase E.C. BRENDA

Primary referenceA Mechanism for Tunable Autoinhibition in the Structure of a Human Ca(2+)/Calmodulin- Dependent Kinase II Holoenzyme., Chao LH, Stratton MM, Lee IH, Rosenberg OS, Levitz J, Mandell DJ, Kortemme T, Groves JT, Schulman H, Kuriyan J, Cell. 2011 Sep 2;146(5):732-45. PMID:21884935
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk]
  • Biological Unit Coordinates (3soa.pdb1.gz) 1856 Kb
  • LPC: Ligand-Protein Contacts for 3SOA
  • CSU: Contacts of Structural Units for 3SOA
  • Structure Factors (50 Kb)
  • Retrieve 3SOA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SOA from S2C, [Save to disk]
  • Re-refined 3soa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3SOA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3SOA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3SOA, from MSDmotif at EBI
  • Fold representative 3soa from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3soa_A] [3soa]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3SOA: [S_TKc ] by SMART
  • Alignments of the sequence of 3SOA with the sequences similar proteins can be viewed for 3SOA's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 3SOA
  • Community annotation for 3SOA at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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