3SOB	Protein Binding Immune System	date	Jun 30, 2011
title	The Structure Of The First Ywtd Beta Propeller Domain Of Lrp Complex With A Fab
authors	W.Wang, E.Bourhis, C.Tam, Y.Zhang, L.Rouge, Y.Wu, Y.Franke, A.G.Coc
compound		source
Molecule: Antibody Light Chain Chain: L Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108
Molecule: Low-Density Lipoprotein Receptor-Related Protein Chain: B Fragment: Unp Residues 20-335 Synonym: Lrp-6 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Lrp6 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Antibody Heavy Chain Chain: H Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.174 R_Free 0.212
crystal cell	length a length b length c angle alpha angle beta angle gamma 167.037 83.363 62.844 90.00 111.80 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	CA	enzyme
Primary reference	Wnt antagonists bind through a short peptide to the first beta-propeller domain of LRP5/6., Bourhis E, Wang W, Tam C, Hwang J, Zhang Y, Spittler D, Huang OW, Gong Y, Estevez A, Zilberleyb I, Rouge L, Chiu C, Wu Y, Costa M, Hannoush RN, Franke Y, Cochran AG, Structure. 2011 Oct 12;19(10):1433-42. Epub 2011 Sep 22. PMID:21944579

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (257 Kb) [Save to disk] Biological Unit Coordinates (3sob.pdb1.gz) 251 Kb LPC: Ligand-Protein Contacts for 3SOB CSU: Contacts of Structural Units for 3SOB Structure Factors (1493 Kb) Retrieve 3SOB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3SOB from S2C, [Save to disk] Re-refined 3sob structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SOB in 3D

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Visual 3D analysis of 3SOB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3SOB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3sob_B] [3sob_H] [3sob] [3sob_L] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3SOB: [EGF] [IG_like] [IGv] [LY ] by SMART

Other resources with information on 3SOB

Community annotation for 3SOB at PDBWiki (http://pdbwiki.org)

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