OCA Atlas for 3SQH

3SQH

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
E

Primary reference

Crystal Structures of Prethrombin-2 Reveal Alternative Conformations under Identical Solution Conditions and the Mechanism of Zymogen Activation., Pozzi N, Chen Z, Zapata F, Pelc LA, Barranco-Medina S, Di Cera E, Biochemistry. 2011 Nov 29;50(47):10195-202. Epub 2011 Nov 8. PMID:22049947

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]

Biological Unit Coordinates (3sqh.pdb1.gz) 98 Kb

CSU: Contacts of Structural Units for 3SQH

Structure Factors (191 Kb)

Retrieve 3SQH in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3SQH from S2C, [Save to disk]

Re-refined 3sqh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SQH in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3sqh] [3sqh_E]

SWISS-PROT database:

Domain found in 3SQH: [Tryp_SPc ] by SMART

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