3SQI	Dna Binding Protein Dna	date	Jul 05, 2011
title	Dna Binding Domain Of Ndc10
authors	U.S.Cho, S.C.Harrison
compound		source
Molecule: Klla0e03807p Chain: A Fragment: Dna Binding Domain (Residues 1-534) Engineered: Yes		Organism_scientific: Kluyveromyces Lactis Organism_common: Yeast Organism_taxid: 284590 Strain: Nrrl Y-1140 Gene: Klla0e03807g Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet3a
Molecule: Dna (5'-D(Ptptpapaptptptpaptpapapapa 3'); Chain: B Engineered: Yes Other_details: Centromere Dna Element III		Synthetic: Yes Other_details: Synthetic Construct
Molecule: Dna (5'-D(Papapaptptptptpaptpapapapt 3'); Chain: C Engineered: Yes		Synthetic: Yes Other_details: Synthetic Construct
symmetry	Space Group: C 2 2 21	R_factor 0.193 R_Free 0.251
crystal cell	length a length b length c angle alpha angle beta angle gamma 117.303 147.536 95.639 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.82 Å
Primary reference	Ndc10 is a platform for inner kinetochore assembly in budding yeast., Cho US, Harrison SC, Nat Struct Mol Biol. 2011 Dec 4. doi: 10.1038/nsmb.2178. PMID:22139014

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk] Biological Unit Coordinates (3sqi.pdb1.gz) 163 Kb CSU: Contacts of Structural Units for 3SQI Structure Factors (301 Kb) Retrieve 3SQI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3SQI from S2C, [Save to disk] Re-refined 3sqi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SQI in 3D

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Visual 3D analysis of 3SQI

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3SQI, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3sqi] [3sqi_B] [3sqi_C] [3sqi_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3SQI

Community annotation for 3SQI at PDBWiki (http://pdbwiki.org)

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