OCA Atlas for 3STJ

3STJ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
E, G, F, I, J, L, B, H, K, A, C, D

Primary reference

Molecular adaptation of the DegQ protease to exert protein quality control in the bacterial cell envelope., Sawa J, Malet H, Krojer T, Canellas F, Ehrmann M, Clausen T, J Biol Chem. 2011 Jun 17. PMID:21685389

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (532 Kb) [Save to disk]

Biological Unit Coordinates (3stj.pdb1.gz) 138 Kb

Biological Unit Coordinates (3stj.pdb2.gz) 136 Kb

Biological Unit Coordinates (3stj.pdb3.gz) 137 Kb

Biological Unit Coordinates (3stj.pdb4.gz) 137 Kb

Biological Unit Coordinates (3stj.pdb5.gz) 526 Kb

CSU: Contacts of Structural Units for 3STJ

Structure Factors (2710 Kb)

Retrieve 3STJ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3STJ from S2C, [Save to disk]

Re-refined 3stj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3STJ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3stj] [3stj_A] [3stj_B] [3stj_C] [3stj_D] [3stj_E] [3stj_F] [3stj_G] [3stj_H] [3stj_I] [3stj_J] [3stj_K] [3stj_L] [3stj_M] [3stj_N] [3stj_O] [3stj_P] [3stj_Q] [3stj_R] [3stj_S] [3stj_T] [3stj_U] [3stj_V] [3stj_W] [3stj_X] [3stj_Z]

SWISS-PROT database:

Domain found in 3STJ: [PDZ ] by SMART

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