3SWM	Transcription Dna	date	Jul 14, 2011
title	The Nac Domain Of Anac019 In Complex With Dna, Gold Derivati
authors	D.Welner, L.Lo Leggio
compound		source
Molecule: Nac Domain-Containing Protein 19 Chain: A, B, C, D Fragment: Nac Domain (Unp Residues 1-168) Synonym: Anac019, Abscicic-Acid-Responsive Nac, Anac Engineered: Yes		Organism_scientific: Arabidopsis Thaliana Organism_common: Mouse-Ear Cress Organism_taxid: 3702 Gene: Nac019, Anac, At1g52890, F14g24.16 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Oligonucleotide Forward Chain: E Engineered: Yes		Synthetic: Yes
Molecule: Oligonucleotide Reverse Chain: F Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 21 21 21	R_factor 0.250 R_Free 0.309
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.530 109.070 173.940 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	4.25 Å
ligand	AU	enzyme
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	DNA binding by the plant specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors., Welner DH, Lindemose S, Grossmann JG, Mollegaard NE, Olsen AN, Helgstrand C, Skriver K, Lo Leggio L, Biochem J. 2012 Mar 29. PMID:22455904

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (255 Kb) [Save to disk] Biological Unit Coordinates (3swm.pdb1.gz) 247 Kb LPC: Ligand-Protein Contacts for 3SWM CSU: Contacts of Structural Units for 3SWM Structure Factors (118 Kb) Retrieve 3SWM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3SWM from S2C, [Save to disk] Re-refined 3swm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SWM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3SWM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3SWM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3swm_C] [3swm_B] [3swm_D] [3swm_A] [3swm_F] [3swm_E] [3swm] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3SWM

Community annotation for 3SWM at PDBWiki (http://pdbwiki.org)

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