3T0H Chaperone date Jul 20, 2011
title Structure Insights Into Mechanisms Of Atp Hydrolysis And The Activation Of Human Hsp90
authors J.Li
compound source
Molecule: Heat Shock Protein Hsp 90-Alpha
Chain: A
Fragment: Unp Residues 9-236
Synonym: Heat Shock 86 Kda, Hsp 86, Hsp86, Renal Carcinoma Ny-Ren-38;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hsp90a, Hsp90aa1, Hspc1, Hspca
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: I 2 2 2
R_factor 0.150 R_Free 0.171
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.287 88.934 99.672 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.20 Å
note 3T0H is a representative structure
Primary referenceStructure insights into mechanisms of ATP hydrolysis and the activation of human heat-shock protein 90., Li J, Sun L, Xu C, Yu F, Zhou H, Zhao Y, Zhang J, Cai J, Mao C, Tang L, Xu Y, He J, Acta Biochim Biophys Sin (Shanghai). 2012 Apr;44(4):300-6. doi:, 10.1093/abbs/gms001. Epub 2012 Feb 7. PMID:22318716
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (3t0h.pdb1.gz) 117 Kb
  • Biological Unit Coordinates (3t0h.pdb2.gz) 233 Kb
  • CSU: Contacts of Structural Units for 3T0H
  • Structure Factors (1018 Kb)
  • Retrieve 3T0H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3T0H from S2C, [Save to disk]
  • Re-refined 3t0h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3T0H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3T0H
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3T0H, from MSDmotif at EBI
  • Fold representative 3t0h from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3t0h] [3t0h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3T0H: [HATPase_c ] by SMART
  • Other resources with information on 3T0H
  • Community annotation for 3T0H at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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