3T1K Chaperone date Jul 22, 2011
title Hsp90 N-Terminal Domain Bound To Anp
authors J.Li
compound source
Molecule: Heat Shock Protein Hsp 90-Alpha
Chain: A, B
Fragment: Unp Residues 9-236
Synonym: Heat Shock 86 Kda, Hsp 86, Hsp86, Renal Carcinoma Ny-Ren-38;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hsp90a, Hsp90aa1, Hspc1, Hspca
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 1
R_factor 0.162 R_Free 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.274 55.969 60.535 93.39 95.82 112.49
method X-Ray Diffractionresolution 1.50 Å
ligand ANP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (3t1k.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (3t1k.pdb2.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 3T1K
  • CSU: Contacts of Structural Units for 3T1K
  • Structure Factors (835 Kb)
  • Retrieve 3T1K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3T1K from S2C, [Save to disk]
  • Re-refined 3t1k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3T1K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3T1K
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3T1K, from MSDmotif at EBI
  • Fold representative 3t1k from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3t1k] [3t1k_B] [3t1k_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3T1K: [HATPase_c ] by SMART
  • Other resources with information on 3T1K
  • Community annotation for 3T1K at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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