3T3Q Oxidoreductase date Jul 25, 2011
title Human Cytochrome P450 2a6 I208si300fg301as369g In Complex Pilocarpine
authors N.M.Devore, E.E.Scott
compound source
Molecule: Cytochrome P450 2a6
Chain: A, B, C, D
Fragment: Unp Residues 29-494
Synonym: Cypiia6, Coumarin 7-Hydroxylase, Cytochrome P450 I Cytochrome P450(I);
Ec: 1.14.14.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cyp2a3, Cyp2a6, Cyp2a6 I208si300fg301as369g
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Topp3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pkk2a6dh I208si300fg301as369g
symmetry Space Group: P 1 21 1
R_factor 0.211 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.952 159.836 103.855 90.00 91.79 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand 9PL, HEM enzyme Oxidoreductase E.C.1.14.14.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural comparison of cytochromes P450 2A6, 2A13, and 2E1 with pilocarpine., Devore NM, Meneely KM, Bart AG, Stephens ES, Battaile KP, Scott EE, FEBS J. 2011 Nov 3. doi: 10.1111/j.1742-4658.2011.08412.x. PMID:22051186
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (314 Kb) [Save to disk]
  • Biological Unit Coordinates (3t3q.pdb1.gz) 81 Kb
  • Biological Unit Coordinates (3t3q.pdb2.gz) 80 Kb
  • Biological Unit Coordinates (3t3q.pdb3.gz) 79 Kb
  • Biological Unit Coordinates (3t3q.pdb4.gz) 80 Kb
  • LPC: Ligand-Protein Contacts for 3T3Q
  • CSU: Contacts of Structural Units for 3T3Q
  • Structure Factors (1910 Kb)
  • Retrieve 3T3Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3T3Q from S2C, [Save to disk]
  • Re-refined 3t3q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3T3Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3T3Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3T3Q, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3t3q_B] [3t3q] [3t3q_D] [3t3q_C] [3t3q_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3T3Q
  • Community annotation for 3T3Q at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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