3T4Q Hormone Receptor date Jul 26, 2011
title Arabidopsis Histidine Kinase 4 Sensor Domain In Complex With Zeatin Riboside (Hydrolysed)
authors M.Hothorn
compound source
Molecule: Histidine Kinase 4
Chain: A, B
Fragment: Unp Residues 149-418
Synonym: Arabidopsis Histidine Kinase 4, Athk4, Cytokinin R Cytokinin Response 1, Atcre1, Cytokinin Receptor Cre1, Phos Phosphatase Ahk4, Protein Authentic His-Kinase 4, Protein R Wol 1, Protein Wooden Leg;
Ec: 2.7.13.3, 3.1.3.16
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress,Thale-Cress
Organism_taxid: 3702
Gene: Ahk4, At2g01830, Cre1, Raw1, T23k3.2, Wol
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Origami (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmh-Hssumo
symmetry Space Group: P 32 2 1
R_factor 0.178 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.900 59.900 297.440 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand MLI, ZEA BindingDB enzyme Transferase E.C.2.7.13.3 BRENDA
Primary referenceStructural basis for cytokinin recognition by Arabidopsis thaliana histidine kinase 4., Hothorn M, Dabi T, Chory J, Nat Chem Biol. 2011 Oct 2;7(11):766-8. doi: 10.1038/nchembio.667. PMID:21964459
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (3t4q.pdb1.gz) 179 Kb
  • LPC: Ligand-Protein Contacts for 3T4Q
  • CSU: Contacts of Structural Units for 3T4Q
  • Structure Factors (224 Kb)
  • Retrieve 3T4Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3T4Q from S2C, [Save to disk]
  • Re-refined 3t4q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3T4Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3T4Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3T4Q, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3t4q_B] [3t4q] [3t4q_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3T4Q: [CHASE ] by SMART
  • Other resources with information on 3T4Q
  • Community annotation for 3T4Q at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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