3T7L	Transport Protein	date	Jul 30, 2011
title	Crystal Structure Of The Fyve Domain Of Endofin (Zfyve16) At Resolution
authors	A.Chaikuad, E.Williams, K.Guo, C.Sanvitale, G.Berridge, T.Krojer, J.R.C.Muniz, P.Canning, C.Phillips, A.Shrestha, F.Von Delft, J.W C.H.Arrowsmith, A.M.Edwards, C.Bountra, A.Bullock, Structural G Consortium (Sgc)
compound		source
Molecule: Zinc Finger Fyve Domain-Containing Protein 16 Chain: A Fragment: Fyve Domain (Unp Residues 733-820) Synonym: Endofin, Endosome-Associated Fyve Domain Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Kiaa0305, Zfyve16 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic-Zb
symmetry	Space Group: P 43 21 2	R_factor 0.142 R_Free 0.154
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.944 42.944 76.879 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.09 Å
ligand	EDO, ZN	enzyme
note	3T7L is a representative structure
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk] Biological Unit Coordinates (3t7l.pdb1.gz) 29 Kb LPC: Ligand-Protein Contacts for 3T7L CSU: Contacts of Structural Units for 3T7L Structure Factors (424 Kb) Retrieve 3T7L in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3T7L from S2C, [Save to disk] Re-refined 3t7l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3T7L in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3T7L

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3T7L, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3t7l_A] [3t7l] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3T7L: [FYVE ] by SMART

Other resources with information on 3T7L

Community annotation for 3T7L at PDBWiki (http://pdbwiki.org)

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