3TAB	Transferase Dna	date	Aug 03, 2011
title	5-Hydroxycytosine Paired With Dgmp In Rb69 Gp43
authors	K.E.Zahn
compound		source
Molecule: Dna Polymerase Chain: A, B, C, D Synonym: Gp43 Ec: 2.7.7.7 Engineered: Yes Mutation: Yes		Organism_scientific: Enterobacteria Phage Rb69 Organism_taxid: 12353 Gene: 43, Gp43 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (5'-D(Cpcp(5oc) Pgpgptpaptpgpapcpapgpcpcpgpcpg)-3'); Chain: E, G, I, K Engineered: Yes Other_details: Template Dna		Synthetic: Yes Other_details: Oligonucleotide
Molecule: Dna (5'-D(Gpcpgpgpcptpgptpcpaptpapcp 3'); Chain: F, H, J, L Engineered: Yes Other_details: Primer Dna		Synthetic: Yes Other_details: Oligonucleotide
symmetry	Space Group: P 1 21 1	R_factor 0.232 R_Free 0.281
crystal cell	length a length b length c angle alpha angle beta angle gamma 132.763 121.931 168.912 90.00 96.63 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	5OC, SO4	enzyme	Transferase E.C.2.7.7.7 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B DNA-directed DNA polymerase ... nuclease activity exonuclease activity 3'-5' exonuclease activity
Primary reference	The Miscoding Potential of 5-Hydroxycytosine Arises Due to Template Instability in the Replicative Polymerase Active Site., Zahn KE, Averill A, Wallace SS, Doublie S, Biochemistry. 2011 Nov 3. PMID:22026756

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1303 Kb) [Save to disk] Biological Unit Coordinates (3tab.pdb1.gz) 326 Kb Biological Unit Coordinates (3tab.pdb2.gz) 326 Kb Biological Unit Coordinates (3tab.pdb3.gz) 329 Kb Biological Unit Coordinates (3tab.pdb4.gz) 332 Kb LPC: Ligand-Protein Contacts for 3TAB CSU: Contacts of Structural Units for 3TAB Structure Factors (6623 Kb) Retrieve 3TAB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TAB from S2C, [Save to disk] Re-refined 3tab structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 3TAB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TAB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tab_L] [3tab_H] [3tab_C] [3tab_I] [3tab_F] [3tab_A] [3tab] [3tab_K] [3tab_J] [3tab_E] [3tab_B] [3tab_D] [3tab_G] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3TAB: [POLBc ] by SMART

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Community annotation for 3TAB at PDBWiki (http://pdbwiki.org)

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