3TB3	Hydrolase	date	Aug 05, 2011
title	Crystal Structure Of The Uch Domain Of Uch-L5 With 6 Residue
authors	Z.R.Zhou, M.Zha, J.Zhou, H.Y.Hu
compound		source
Molecule: Ubiquitin Carboxyl-Terminal Hydrolase Isozyme L5 Chain: A, B Fragment: Uch Domain (Unp Residues 1-227) Synonym: Uch-L5, Ubiquitin C-Terminal Hydrolase Uch37, Ubiq Thioesterase L5; Ec: 3.4.19.12 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ad-019, Cgi-70, Uch-L5, Uch37, Uchl5 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.222 R_Free 0.269
crystal cell	length a length b length c angle alpha angle beta angle gamma 47.540 102.340 47.060 90.00 92.13 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	CA	enzyme	Hydrolase E.C.3.4.19.12 BRENDA
note	3TB3 supersedes 3SQA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Length of the active-site crossover loop defines the substrate specificity of ubiquitin C-terminal hydrolases for ubiquitin chains., Zhou ZR, Zhang YH, Liu S, Song AX, Hu HY, Biochem J. 2012 Jan 1;441(1):143-9. PMID:21851340

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk] Biological Unit Coordinates (3tb3.pdb1.gz) 69 Kb Biological Unit Coordinates (3tb3.pdb2.gz) 70 Kb LPC: Ligand-Protein Contacts for 3TB3 CSU: Contacts of Structural Units for 3TB3 Structure Factors (134 Kb) Retrieve 3TB3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TB3 from S2C, [Save to disk] Re-refined 3tb3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TB3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tb3] [3tb3_B] [3tb3_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 3TB3 at PDBWiki (http://pdbwiki.org)

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