3TCP	Transferase Transferase Inhibitor	date	Aug 09, 2011
title	Crystal Structure Of The Catalytic Domain Of The Proto-Oncog Tyrosine-Protein Kinase Mer In Complex With Inhibitor Unc56
authors	J.Liu, C.Yang, C.Simpson, D.Deryckere, A.Van Deusen, M.Miley, D.B. J.Norris-Drouin, S.Sather, D.Hunter, H.S.Patel, W.P.Janzen, M.Ma G.Johnson, H.S.Earp, D.K.Graham, S.Frye, X.Wang
compound		source
Molecule: Tyrosine-Protein Kinase Mer Chain: A, B Fragment: Catalytic Domain, Unp Residues 570-864 Synonym: Proto-Oncogene C-Mer, Receptor Tyrosine Kinase Mer Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mertk, Mer Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Rosetta Bl21(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28
symmetry	Space Group: P 1 21 1	R_factor 0.225 R_Free 0.298
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.158 91.142 68.356 90.00 100.35 90.00
method	X-Ray Diffraction	resolution	2.69 Å
ligand	CA, CKJ, CL BindingDB	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Discovery of Novel Small Molecule Mer Kinase Inhibitors for the Treatment of Pediatric Acute Lymphoblastic Leukemia., Liu J, Yang C, Simpson C, Deryckere D, Van Deusen A, Miley MJ, Kireev D, Norris-Drouin J, Sather S, Hunter D, Korboukh VK, Patel HS, Janzen WP, Machius M, Johnson GL, Earp HS, Graham DK, Frye SV, Wang X, ACS Med Chem Lett. 2012 Feb 9;3(2):129-134. PMID:22662287

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk] Biological Unit Coordinates (3tcp.pdb1.gz) 88 Kb Biological Unit Coordinates (3tcp.pdb2.gz) 85 Kb LPC: Ligand-Protein Contacts for 3TCP CSU: Contacts of Structural Units for 3TCP Structure Factors (119 Kb) Retrieve 3TCP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TCP from S2C, [Save to disk] Re-refined 3tcp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3TCP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3TCP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TCP, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tcp] [3tcp_A] [3tcp_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3TCP: [TyrKc ] by SMART

Other resources with information on 3TCP

Community annotation for 3TCP at PDBWiki (http://pdbwiki.org)

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