3TJW Structural Protein date Aug 25, 2011
title Crystal Structure Of Quasiracemic Villin Headpiece Subdomain Containing (F5phe10) Substitution
authors D.E.Mortenson, K.A.Satyshur, S.H.Gellman, K.T.Forest
compound source
Molecule: D-Villin-1
Chain: A
Fragment: Headpiece Subdomain (Unp Residues 792-825)
Engineered: Yes
Mutation: Yes
Synthetic: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Other_details: Synthesized Using Fmoc-Protected D-Amino Aci

Molecule: L-Villin-1
Chain: B
Fragment: Headpiece Subdomain (Unp Residues 792-825)
Engineered: Yes
Mutation: Yes

Synthetic: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Other_details: Synthesized Using Fmoc-Protected L-Amino Aci
symmetry Space Group: F 2 2 2
R_factor 0.150 R_Free 0.190
crystal
cell
length a length b length c angle alpha angle beta angle gamma
38.656 88.112 88.663 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.46 Å
ligand DAL, DAR, DAS, DGL, DGN, DHI, DLE, DLY, DPN, DPR, DSG, DSN, DTH, DTR, DVA, MED, PF5, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceQuasiracemic Crystallization as a Tool To Assess the Accommodation of Noncanonical Residues in Nativelike Protein Conformations., Mortenson DE, Satyshur KA, Guzei IA, Forest KT, Gellman SH, J Am Chem Soc. 2012 Jan 18. PMID:22280019
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (3tjw.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (3tjw.pdb2.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 3TJW
  • CSU: Contacts of Structural Units for 3TJW
  • Structure Factors (303 Kb)
  • Retrieve 3TJW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TJW from S2C, [Save to disk]
  • Re-refined 3tjw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TJW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TJW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TJW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tjw] [3tjw_A] [3tjw_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3TJW: [VHP ] by SMART
  • Other resources with information on 3TJW
  • Community annotation for 3TJW at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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