3TKU Transferase Transferase Inhibitor date Aug 29, 2011
title Mrck Beta In Complex With Fasudil
authors T.J.Heikkila, A.Turnbull, E.Wheatley, E.Schroder, D.Crighton, M.F
compound source
Molecule: Serinethreonine-Protein Kinase Mrck Beta
Chain: A, B
Fragment: Unp Residues 2-417
Synonym: Cdc42-Binding Protein Kinase Beta, Dmpk-Like Beta, Dystrophy Kinase-Related Cdc42-Binding Kinase Beta, Mrck Be Myotonic Dystrophy Protein Kinase-Like Beta;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdc42bpb, Kiaa1124
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 De3
symmetry Space Group: P 1 21 1
R_factor 0.221 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.950 123.520 84.770 90.00 101.13 90.00
method X-Ray Diffractionresolution 2.15 Å
ligand EDO, M77 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCo-crystal structures of inhibitors with MRCKbeta, a key regulator of tumor cell invasion., Heikkila T, Wheatley E, Crighton D, Schroder E, Boakes A, Kaye SJ, Mezna M, Pang L, Rushbrooke M, Turnbull A, Olson MF, PLoS One. 2011;6(9):e24825. Epub 2011 Sep 20. PMID:21949762
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (269 Kb) [Save to disk]
  • Biological Unit Coordinates (3tku.pdb1.gz) 262 Kb
  • LPC: Ligand-Protein Contacts for 3TKU
  • CSU: Contacts of Structural Units for 3TKU
  • Structure Factors (734 Kb)
  • Retrieve 3TKU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TKU from S2C, [Save to disk]
  • Re-refined 3tku structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TKU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TKU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TKU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tku_A] [3tku_B] [3tku]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3TKU: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 3TKU
  • Community annotation for 3TKU at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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