3TOB Transferase date Sep 04, 2011
title Human Mof E350q Crystal Structure With Active Site Lysine Pa Acetylated
authors H.Yuan, E.C.Ding, R.Marmorstein
compound source
Molecule: Histone Acetyltransferase Myst1
Chain: A
Fragment: Unp Residues 177-447
Synonym: Myst-1, Moz, Ybf2sas3, Sas2 And Tip60 Protein 1,
Ec: 2.3.1.48
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Myst1, Mof, Pp7073
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.203 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.971 58.042 120.338 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand ALY, CL, ZN enzyme Transferase E.C.2.3.1.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMYST protein acetyltransferase activity requires active site lysine autoacetylation., Yuan H, Rossetto D, Mellert H, Dang W, Srinivasan M, Johnson J, Hodawadekar S, Ding EC, Speicher K, Abshiru N, Perry R, Wu J, Yang C, Zheng YG, Speicher DW, Thibault P, Verreault A, Johnson FB, Berger SL, Sternglanz R, McMahon SB, Cote J, Marmorstein R, EMBO J. 2011 Oct 21. doi: 10.1038/emboj.2011.382. PMID:22020126
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (3tob.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 3TOB
  • CSU: Contacts of Structural Units for 3TOB
  • Structure Factors (341 Kb)
  • Retrieve 3TOB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TOB from S2C, [Save to disk]
  • View 3TOB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TOB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TOB, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tob] [3tob_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3TOB
  • Community annotation for 3TOB at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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