3TPD	Transferase	date	Sep 07, 2011
title	Structure Of Phipa, Monoclinic Form
authors	M.A.Schumacher, T.Link, R.G.Brennan
compound		source
Molecule: Serinethreonine-Protein Kinase Hipa Chain: A Synonym: Serthr-Protein Kinase Hipa, Toxin Hipa Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.213 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.480 84.060 50.060 90.00 90.13 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	CL, PO4	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A bacterial-type RNA polymeras...
Primary reference	Role of Unusual P Loop Ejection and Autophosphorylation in HipA-Mediated Persistence and Multidrug Tolerance., Schumacher MA, Min J, Link TM, Guan Z, Xu W, Ahn YH, Soderblom EJ, Kurie JM, Evdokimov A, Moseley MA, Lewis K, Brennan RG, Cell Rep. 2012 Sep 27;2(3):518-25. doi: 10.1016/j.celrep.2012.08.013. Epub 2012, Sep 20. PMID:22999936

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk] Biological Unit Coordinates (3tpd.pdb1.gz) 70 Kb LPC: Ligand-Protein Contacts for 3TPD CSU: Contacts of Structural Units for 3TPD Structure Factors (404 Kb) Retrieve 3TPD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TPD from S2C, [Save to disk] Re-refined 3tpd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3TPD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3TPD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TPD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tpd_A] [3tpd] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3TPD

Community annotation for 3TPD at PDBWiki (http://pdbwiki.org)

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