3TRW Structural Protein date Sep 11, 2011
title Crystal Structure Of Racemic Villin Headpiece Subdomain Crys In Space Group P-1
authors D.E.Mortenson, K.A.Satyshur, S.H.Gellman, K.T.Forest
compound source
Molecule: Villin-1
Chain: A, D
Fragment: Headpiece Subdomain (Unp Residues 792-826)
Engineered: Yes
Mutation: Yes
Synthetic: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
symmetry Space Group: P -1
R_factor 0.291 R_Free 0.352
crystal
cell
length a length b length c angle alpha angle beta angle gamma
28.380 31.730 36.750 90.12 99.61 96.52
method X-Ray Diffractionresolution 2.10 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D


Primary referenceQuasiracemic Crystallization as a Tool To Assess the Accommodation of Noncanonical Residues in Nativelike Protein Conformations., Mortenson DE, Satyshur KA, Guzei IA, Forest KT, Gellman SH, J Am Chem Soc. 2012 Jan 18. PMID:22280019
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (3trw.pdb1.gz) 6 Kb
  • Biological Unit Coordinates (3trw.pdb2.gz) 6 Kb
  • CSU: Contacts of Structural Units for 3TRW
  • Structure Factors (195 Kb)
  • Retrieve 3TRW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TRW from S2C, [Save to disk]
  • Re-refined 3trw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TRW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TRW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TRW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3trw_D] [3trw] [3trw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3TRW: [VHP ] by SMART
  • Other resources with information on 3TRW
  • Community annotation for 3TRW at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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