3TTJ Transferase Transferase Inhibitor date Sep 14, 2011
title Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhib The Prevention Of Ischemia-Reperfusion Injury
authors V.Plantevin-Krenitsky, M.Delgado, L.Nadolny, K.Sahasrabudhe, S.A S.Clareen, R.Hilgraf, R.Albers, A.Kois, K.Hughes, J.Wright, J.Now E.Sudbeck, S.Ghosh, S.Bahmanyar, P.Chamberlain, J.Muir, B.E.Cath D.Giegel, L.Xu, M.Celeridad, M.Moghaddam, O.Khatsenko, P.Omholt, S.Pai, R.Fan, Y.Tang, M.A.Shirley, B.Benish, K.Blease, H.Raymon, S B.Bennett, Y.Satoh
compound source
Molecule: Mitogen-Activated Protein Kinase 10
Chain: A
Synonym: Map Kinase 10, Mapk 10, Map Kinase P49 3f12, Stres Activated Protein Kinase Jnk3, C-Jun N-Terminal Kinase 3;
Ec: 2.7.11.24
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mapk10, Jnk3, Jnk3a, Prkm10
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21d
symmetry Space Group: P 21 21 21
R_factor 0.202 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.173 70.733 106.396 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand JBI BindingDB enzyme Transferase E.C.2.7.11.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • MAP kinase kinase activity


  • Primary referenceAminopurine based JNK inhibitors for the prevention of ischemia reperfusion injury., Krenitsky VP, Delgado M, Nadolny L, Sahasrabudhe K, Ayala L, Clareen SS, Hilgraf R, Albers R, Kois A, Hughes K, Wright J, Nowakowski J, Sudbeck E, Ghosh S, Bahmanyar S, Chamberlain P, Muir J, Cathers BE, Giegel D, Xu L, Celeridad M, Moghaddam M, Khatsenko O, Omholt P, Katz J, Pai S, Fan R, Tang Y, Shirley MA, Benish B, Blease K, Raymon H, Bhagwat S, Henderson I, Cole AG, Bennett B, Satoh Y, Bioorg Med Chem Lett. 2011 Dec 11. PMID:22226655
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (3ttj.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 3TTJ
  • CSU: Contacts of Structural Units for 3TTJ
  • Structure Factors (342 Kb)
  • Retrieve 3TTJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TTJ from S2C, [Save to disk]
  • Re-refined 3ttj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TTJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TTJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TTJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ttj] [3ttj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3TTJ: [S_TKc ] by SMART
  • Other resources with information on 3TTJ
  • Community annotation for 3TTJ at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science